Carnation DB

Dca58701.1

Annotation

7-exons
f-1
sp|F6HPN7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0026g00140#GO:0003676;GO:0000166;GO:0006397#2F1P0C
AT1G60200.1 | Symbols: | splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein | chr1:22200882-22205241 REVERSE LENGTH=899
Repeat List (scaffold864)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58701.1	183	908	919	46.46	726	55	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HPN7_VITVI	151	913	958	79.64

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58701.1	133	908	919	41.02	776	46	2e-137
Target_name	Start	End	Length	Cov(%)
AT1G60200.1	81	854	899	86.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold864	Augustus	mRNA	168117	174990	.	+	.	ID=Dca58701.1;Parent=Dca58701
scaffold864	Augustus	exon	168117	168708	.	+	.	ID=Dca58701.1.exon1;Parent=Dca58701.1
scaffold864	Augustus	exon	171030	171280	.	+	.	ID=Dca58701.1.exon2;Parent=Dca58701.1
scaffold864	Augustus	exon	171400	171552	.	+	.	ID=Dca58701.1.exon3;Parent=Dca58701.1
scaffold864	Augustus	exon	171743	172184	.	+	.	ID=Dca58701.1.exon4;Parent=Dca58701.1
scaffold864	Augustus	exon	172638	173309	.	+	.	ID=Dca58701.1.exon5;Parent=Dca58701.1
scaffold864	Augustus	exon	174165	174664	.	+	.	ID=Dca58701.1.exon6;Parent=Dca58701.1
scaffold864	Augustus	exon	174841	174990	.	+	.	ID=Dca58701.1.exon7;Parent=Dca58701.1