Carnation DB

Dca58704.1

Annotation

10-exons
f-1
sp|A9PEV6_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0005737;GO:0005524;GO:0017111;GO:0030163#2F1P1C
AT5G43010.1 | Symbols: RPT4A | regulatory particle triple-A ATPase 4A | chr5:17248563-17251014 REVERSE LENGTH=399
Repeat List (scaffold864)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58704.1	12	406	406	91.37	395	94	0
Target_name	Start	End	Length	Cov(%)
sp\|A9PEV6_POPTR	5	399	399	98.99

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58704.1	12	406	406	90.88	395	94	0
Target_name	Start	End	Length	Cov(%)
AT5G43010.1	4	399	399	99.24

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold864	Augustus	mRNA	196189	200255	.	-	.	ID=Dca58704.1;Parent=Dca58704
scaffold864	Augustus	exon	196189	196263	.	-	.	ID=Dca58704.1.exon1;Parent=Dca58704.1
scaffold864	Augustus	exon	197034	197132	.	-	.	ID=Dca58704.1.exon2;Parent=Dca58704.1
scaffold864	Augustus	exon	197220	197411	.	-	.	ID=Dca58704.1.exon3;Parent=Dca58704.1
scaffold864	Augustus	exon	197515	197652	.	-	.	ID=Dca58704.1.exon4;Parent=Dca58704.1
scaffold864	Augustus	exon	197735	197821	.	-	.	ID=Dca58704.1.exon5;Parent=Dca58704.1
scaffold864	Augustus	exon	197908	197994	.	-	.	ID=Dca58704.1.exon6;Parent=Dca58704.1
scaffold864	Augustus	exon	198115	198276	.	-	.	ID=Dca58704.1.exon7;Parent=Dca58704.1
scaffold864	Augustus	exon	198569	198705	.	-	.	ID=Dca58704.1.exon8;Parent=Dca58704.1
scaffold864	Augus-PASA	exon	198942	199061	.	-	.	ID=Dca58704.1.exon9;Parent=Dca58704.1
scaffold864	Augus-PASA	exon	200132	200255	.	-	.	ID=Dca58704.1.exon10;Parent=Dca58704.1