Carnation DB

Dca58724.1

Annotation

5-exons
f-1
sp|A5BA39_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_041694#GO:0003676;GO:0015074#1F1P0C
Os08t0125300-01 Integrase, catalytic core domain containing protein.
Repeat List (scaffold865)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58724.1	7	480	562	46.26	474	54	2e-137
Target_name	Start	End	Length	Cov(%)
sp\|A5BA39_VITVI	52	529	1099	43.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58724.1	7	412	562	22.24	406	30	1e-47
Target_name	Start	End	Length	Cov(%)
Os08t0125300-01	361	780	1428	29.41

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold865	Augustus	mRNA	18384	28334	.	-	.	ID=Dca58724.1;Parent=Dca58724
scaffold865	Augustus	exon	18384	18481	.	-	.	ID=Dca58724.1.exon1;Parent=Dca58724.1
scaffold865	Augustus	exon	18603	18664	.	-	.	ID=Dca58724.1.exon2;Parent=Dca58724.1
scaffold865	Augustus	exon	21978	22194	.	-	.	ID=Dca58724.1.exon3;Parent=Dca58724.1
scaffold865	Augustus	exon	23713	25011	.	-	.	ID=Dca58724.1.exon4;Parent=Dca58724.1
scaffold865	Augustus	exon	28322	28334	.	-	.	ID=Dca58724.1.exon5;Parent=Dca58724.1