Carnation DB

Dca58867.1

Annotation

8-exons
f-1
sp|Q2HRV5_MEDTR#DNA cross-link repair protein SNM1#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_7g084670, MtrDRAFT_AC157890g17v2#GO:0016787#1F0P0C
Repeat List (scaffold87)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58867.1	28	464	631	41.52	437	59	4e-143
Target_name	Start	End	Length	Cov(%)
sp\|Q2HRV5_MEDTR	37	472	511	85.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58867.1	57	493	631	38.66	437	56	8e-131
Target_name	Start	End	Length	Cov(%)
AT3G26680.1	46	474	484	88.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold87	Augustus	mRNA	188269	193737	.	+	.	ID=Dca58867.1;Parent=Dca58867
scaffold87	Augustus	exon	188269	188782	.	+	.	ID=Dca58867.1.exon1;Parent=Dca58867.1
scaffold87	Augustus	exon	189645	189825	.	+	.	ID=Dca58867.1.exon2;Parent=Dca58867.1
scaffold87	Augustus	exon	189916	190155	.	+	.	ID=Dca58867.1.exon3;Parent=Dca58867.1
scaffold87	Augustus	exon	190233	190377	.	+	.	ID=Dca58867.1.exon4;Parent=Dca58867.1
scaffold87	Augustus	exon	190810	190944	.	+	.	ID=Dca58867.1.exon5;Parent=Dca58867.1
scaffold87	Augustus	exon	191051	191117	.	+	.	ID=Dca58867.1.exon6;Parent=Dca58867.1
scaffold87	Augustus	exon	191209	191286	.	+	.	ID=Dca58867.1.exon7;Parent=Dca58867.1
scaffold87	Augustus	exon	193202	193737	.	+	.	ID=Dca58867.1.exon8;Parent=Dca58867.1