Dca58906.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold8706)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58906.1 |
37 |
429 |
429 |
68.76 |
393 |
69 |
2e-176
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
538 |
966 |
1501 |
28.58 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58906.1 |
40 |
429 |
429 |
41.25 |
390 |
42 |
2e-91
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
571 |
991 |
1539 |
27.35 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8706 |
Augustus |
mRNA |
1 |
1788 |
. |
- |
. |
ID=Dca58906.1;Parent=Dca58906 |
| scaffold8706 |
Augustus |
exon |
1 |
929 |
. |
- |
. |
ID=Dca58906.1.exon1;Parent=Dca58906.1 |
| scaffold8706 |
Augustus |
exon |
1038 |
1279 |
. |
- |
. |
ID=Dca58906.1.exon2;Parent=Dca58906.1 |
| scaffold8706 |
Augustus |
exon |
1671 |
1788 |
. |
- |
. |
ID=Dca58906.1.exon3;Parent=Dca58906.1 |
