Carnation DB

Dca5892.1

Annotation

8-exons
f-1
sp|B9HRI9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1086748#GO:0003676;GO:0000166#2F0P0C
sp|G7I6T9_MEDTR#Eukaryotic translation initiation factor 3 subunit G#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_1g080390#GO:0000166;GO:0003743#2F0P0C
Repeat List (scaffold12287)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5892.1	79	568	568	47.18	490	54	1e-128
Target_name	Start	End	Length	Cov(%)
sp\|B9HRI9_POPTR	484	974	974	50.41

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5892.1	95	568	568	40.14	474	48	1e-109
Target_name	Start	End	Length	Cov(%)
AT2G21440.1	555	1003	1003	44.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold12287	Augustus	mRNA	17301	19860	.	-	.	ID=Dca5892.1;Parent=Dca5892
scaffold12287	Augustus	exon	17301	18013	.	-	.	ID=Dca5892.1.exon1;Parent=Dca5892.1
scaffold12287	Augustus	exon	18280	18403	.	-	.	ID=Dca5892.1.exon2;Parent=Dca5892.1
scaffold12287	Augustus	exon	18491	18659	.	-	.	ID=Dca5892.1.exon3;Parent=Dca5892.1
scaffold12287	Augustus	exon	18765	18835	.	-	.	ID=Dca5892.1.exon4;Parent=Dca5892.1
scaffold12287	Augustus	exon	18958	19171	.	-	.	ID=Dca5892.1.exon5;Parent=Dca5892.1
scaffold12287	Augustus	exon	19256	19479	.	-	.	ID=Dca5892.1.exon6;Parent=Dca5892.1
scaffold12287	Augustus	exon	19604	19788	.	-	.	ID=Dca5892.1.exon7;Parent=Dca5892.1
scaffold12287	Augustus	exon	19854	19860	.	-	.	ID=Dca5892.1.exon8;Parent=Dca5892.1