Dca58938.1
Annotation
- 2-exons
- f-1
- sp|Q7XBQ6_ORYSJ#Putative retroelement#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0011A24.10#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- Repeat List (scaffold8717)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58938.1 |
2 |
1030 |
1030 |
50.87 |
1029 |
48 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q7XBQ6_ORYSJ |
477 |
1532 |
1661 |
63.57 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58938.1 |
204 |
1030 |
1030 |
30.38 |
827 |
37 |
2e-159
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
410 |
1233 |
1539 |
53.54 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8717 |
Augustus |
mRNA |
6972 |
10141 |
. |
+ |
. |
ID=Dca58938.1;Parent=Dca58938 |
| scaffold8717 |
Augustus |
exon |
6972 |
9378 |
. |
+ |
. |
ID=Dca58938.1.exon1;Parent=Dca58938.1 |
| scaffold8717 |
Augustus |
exon |
9456 |
10141 |
. |
+ |
. |
ID=Dca58938.1.exon2;Parent=Dca58938.1 |
