Carnation DB

Dca58996.1

Annotation

6-exons
f-1
sp|D7MC22_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_493160#GO:0005525;GO:0015031;GO:0007264#1F2P0C
AT4G17170.1 | Symbols: AT-RAB2, ATRABB1C, ATRAB2A, RAB2A, RABB1C, ATRAB-B1B, RAB-B1B | RAB GTPase homolog B1C | chr4:9644908-9646220 REVERSE LENGTH=211
Repeat List (scaffold874)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58996.1	1	211	211	93.36	211	94	1e-115
Target_name	Start	End	Length	Cov(%)
sp\|D7MC22_ARALL	1	211	211	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58996.1	1	211	211	93.36	211	94	1e-116
Target_name	Start	End	Length	Cov(%)
AT4G17170.1	1	211	211	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold874	Augus-PASA	mRNA	93505	97494	.	-	.	ID=Dca58996.1;Parent=Dca58996
scaffold874	Augus-PASA	exon	93505	93597	.	-	.	ID=Dca58996.1.exon1;Parent=Dca58996.1
scaffold874	Augus-PASA	exon	94792	94860	.	-	.	ID=Dca58996.1.exon2;Parent=Dca58996.1
scaffold874	Augus-PASA	exon	94990	95194	.	-	.	ID=Dca58996.1.exon3;Parent=Dca58996.1
scaffold874	Augus-PASA	exon	96406	96488	.	-	.	ID=Dca58996.1.exon4;Parent=Dca58996.1
scaffold874	Augus-PASA	exon	96584	96723	.	-	.	ID=Dca58996.1.exon5;Parent=Dca58996.1
scaffold874	Augus-PASA	exon	97449	97494	.	-	.	ID=Dca58996.1.exon6;Parent=Dca58996.1