Dca59495.1
Annotation
- 3-exons
- f-1
- sp|A5BT46_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_028694#GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P0C
- Os08t0177800-00 Similar to RNase H domain-containing protein.
- Repeat List (scaffold89)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59495.1 |
1 |
559 |
560 |
43.75 |
559 |
41 |
5e-120
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BT46_VITVI |
162 |
736 |
938 |
61.3 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59495.1 |
147 |
290 |
560 |
9.82 |
144 |
36 |
1e-15
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G01410.1 |
125 |
278 |
294 |
52.38 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold89 |
Augustus |
mRNA |
186827 |
188902 |
. |
+ |
. |
ID=Dca59495.1;Parent=Dca59495 |
| scaffold89 |
Augustus |
exon |
186827 |
187164 |
. |
+ |
. |
ID=Dca59495.1.exon1;Parent=Dca59495.1 |
| scaffold89 |
Augustus |
exon |
187326 |
187381 |
. |
+ |
. |
ID=Dca59495.1.exon2;Parent=Dca59495.1 |
| scaffold89 |
Augustus |
exon |
187614 |
188902 |
. |
+ |
. |
ID=Dca59495.1.exon3;Parent=Dca59495.1 |
