Dca59982.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold9031)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59982.1 |
30 |
339 |
358 |
33.51 |
310 |
36 |
2e-50
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
27 |
364 |
1501 |
22.51 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59982.1 |
39 |
210 |
358 |
14.8 |
172 |
31 |
1e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
80 |
251 |
296 |
58.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold9031 |
Augustus |
mRNA |
11298 |
13305 |
. |
+ |
. |
ID=Dca59982.1;Parent=Dca59982 |
| scaffold9031 |
Augustus |
exon |
11298 |
12312 |
. |
+ |
. |
ID=Dca59982.1.exon1;Parent=Dca59982.1 |
| scaffold9031 |
Augustus |
exon |
13244 |
13305 |
. |
+ |
. |
ID=Dca59982.1.exon2;Parent=Dca59982.1 |
