Carnation DB

Dca60008.1

Annotation

6-exons
f-1
sp|A9PGX0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_746752#GO:0003677#1F0P0C
Os05t0547850-01 DNA-binding TFAR19-related protein family protein.
Repeat List (scaffold904)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60008.1	1	129	129	82.94	129	83	6e-53
Target_name	Start	End	Length	Cov(%)
sp\|A9PGX0_POPTR	2	128	128	99.21

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60008.1	1	129	129	79.84	129	80	2e-50
Target_name	Start	End	Length	Cov(%)
Os05t0547850-01	2	128	129	98.44

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold904	Augustus	mRNA	78327	81595	.	+	.	ID=Dca60008.1;Parent=Dca60008
scaffold904	Augustus	exon	78327	78392	.	+	.	ID=Dca60008.1.exon1;Parent=Dca60008.1
scaffold904	Augus-PASA	exon	78491	78546	.	+	.	ID=Dca60008.1.exon2;Parent=Dca60008.1
scaffold904	Augus-PASA	exon	78639	78703	.	+	.	ID=Dca60008.1.exon3;Parent=Dca60008.1
scaffold904	Augus-PASA	exon	81079	81170	.	+	.	ID=Dca60008.1.exon4;Parent=Dca60008.1
scaffold904	Augus-PASA	exon	81306	81377	.	+	.	ID=Dca60008.1.exon5;Parent=Dca60008.1
scaffold904	Augus-PASA	exon	81557	81595	.	+	.	ID=Dca60008.1.exon6;Parent=Dca60008.1