Carnation DB

Dca6007.1

Annotation

5-exons
f-1
sp|F6HFN7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0011g03700#GO:0006950#0F1P0C
sp|G7K1I9_MEDTR#Thioesterase-like protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_5g056390#unknown#0F0P0C
Repeat List (scaffold1233)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6007.1	53	211	216	55.09	159	75	1e-65
Target_name	Start	End	Length	Cov(%)
sp\|F6HFN7_VITVI	202	359	363	43.52

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6007.1	67	211	216	47.68	145	72	1e-58
Target_name	Start	End	Length	Cov(%)
AT1G68260.1	42	186	190	76.31

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1233	Augus-PASA	mRNA	45219	48465	.	-	.	ID=Dca6007.1;Parent=Dca6007
scaffold1233	Augus-PASA	exon	45219	45341	.	-	.	ID=Dca6007.1.exon1;Parent=Dca6007.1
scaffold1233	Augus-PASA	exon	45429	45524	.	-	.	ID=Dca6007.1.exon2;Parent=Dca6007.1
scaffold1233	Augus-PASA	exon	45992	46101	.	-	.	ID=Dca6007.1.exon3;Parent=Dca6007.1
scaffold1233	Augus-PASA	exon	46531	46631	.	-	.	ID=Dca6007.1.exon4;Parent=Dca6007.1
scaffold1233	Augus-PASA	exon	48245	48465	.	-	.	ID=Dca6007.1.exon5;Parent=Dca6007.1