Carnation DB

Dca6017.1

Annotation

5-exons
f-1
sp|F6HNE3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0019g04600#GO:0005524;GO:0016887#2F0P0C
sp|B9HUH9_POPTR#White-brown-complex ABC transporter family#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_228054#GO:0005524;GO:0016887#2F0P0C
Repeat List (scaffold1234)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6017.1	4	371	371	65.49	368	63	2e-133
Target_name	Start	End	Length	Cov(%)
sp\|F6HNE3_VITVI	735	1120	1120	34.46

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6017.1	10	371	371	58.76	362	58	9e-119
Target_name	Start	End	Length	Cov(%)
AT1G53390.1	733	1109	1109	33.99

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1234	Augustus	mRNA	11729	13589	.	-	.	ID=Dca6017.1;Parent=Dca6017
scaffold1234	Augustus	exon	11729	11885	.	-	.	ID=Dca6017.1.exon1;Parent=Dca6017.1
scaffold1234	Augustus	exon	12066	12199	.	-	.	ID=Dca6017.1.exon2;Parent=Dca6017.1
scaffold1234	Augustus	exon	12456	12745	.	-	.	ID=Dca6017.1.exon3;Parent=Dca6017.1
scaffold1234	Augustus	exon	12941	13053	.	-	.	ID=Dca6017.1.exon4;Parent=Dca6017.1
scaffold1234	Augustus	exon	13168	13589	.	-	.	ID=Dca6017.1.exon5;Parent=Dca6017.1