Dca60278.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold9143)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60278.1 |
1 |
345 |
365 |
54.79 |
345 |
52 |
3e-113
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
124 |
514 |
964 |
40.56 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60278.1 |
260 |
326 |
365 |
7.67 |
67 |
42 |
2e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
902 |
965 |
1428 |
4.48 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold9143 |
Augustus |
mRNA |
9 |
1221 |
. |
- |
. |
ID=Dca60278.1;Parent=Dca60278 |
| scaffold9143 |
Augustus |
exon |
9 |
479 |
. |
- |
. |
ID=Dca60278.1.exon1;Parent=Dca60278.1 |
| scaffold9143 |
Augustus |
exon |
595 |
1221 |
. |
- |
. |
ID=Dca60278.1.exon2;Parent=Dca60278.1 |
