Dca60284.1
Annotation
- 3-exons
- f-1
- sp|B2BXJ4_ARALL#LTRGag-pol-polymerase 3#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#Name=LTR3#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold9145)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60284.1 |
1 |
474 |
571 |
30.99 |
474 |
35 |
2e-69
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B2BXJ4_ARALL |
1 |
504 |
1296 |
38.88 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60284.1 |
1 |
359 |
571 |
20.84 |
359 |
32 |
7e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G48050.1 |
1 |
353 |
369 |
95.66 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold9145 |
Augustus |
mRNA |
6074 |
8794 |
. |
+ |
. |
ID=Dca60284.1;Parent=Dca60284 |
| scaffold9145 |
Augustus |
exon |
6074 |
6757 |
. |
+ |
. |
ID=Dca60284.1.exon1;Parent=Dca60284.1 |
| scaffold9145 |
Augustus |
exon |
6834 |
7572 |
. |
+ |
. |
ID=Dca60284.1.exon2;Parent=Dca60284.1 |
| scaffold9145 |
Augustus |
exon |
8502 |
8794 |
. |
+ |
. |
ID=Dca60284.1.exon3;Parent=Dca60284.1 |
