Carnation DB

Dca60699.1

Annotation

13-exons
f-1
sp|F6HXQ9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_09s0002g00830#unknown#0F0P0C
AT1G72390.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Spt20 family (InterPro:IPR021950); Has 8778 Blast hits to 7244 proteins in 477 species: Archae - 6; Bacteria - 326; Metazoa - 4198; Fungi - 1506; Plants - 923; Viruses - 22; Other Eukaryotes - 1797 (source: NCBI BLink). | chr1:27245455-27251218 FORWARD LENGTH=1325
Repeat List (scaffold93)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60699.1	1	1204	1204	50.83	1204	45	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HXQ9_VITVI	1	1359	1359	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60699.1	1108	1204	1204	5.48	97	63	3e-21
Target_name	Start	End	Length	Cov(%)
AT1G72390.1	1221	1325	1325	7.92

seqname	source	feature	start	end	score	strand	frame	group
scaffold93	Augustus	mRNA	247956	254673	.	-	.	ID=Dca60699.1;Parent=Dca60699
scaffold93	Augustus	exon	247956	249383	.	-	.	ID=Dca60699.1.exon1;Parent=Dca60699.1
scaffold93	Augustus	exon	249814	249852	.	-	.	ID=Dca60699.1.exon2;Parent=Dca60699.1
scaffold93	Augustus	exon	250102	250244	.	-	.	ID=Dca60699.1.exon3;Parent=Dca60699.1
scaffold93	Augustus	exon	250361	250566	.	-	.	ID=Dca60699.1.exon4;Parent=Dca60699.1
scaffold93	Augustus	exon	250707	251655	.	-	.	ID=Dca60699.1.exon5;Parent=Dca60699.1
scaffold93	Augus-PASA	exon	252093	252267	.	-	.	ID=Dca60699.1.exon6;Parent=Dca60699.1
scaffold93	Augus-PASA	exon	252379	252477	.	-	.	ID=Dca60699.1.exon7;Parent=Dca60699.1
scaffold93	Augustus	exon	252572	252718	.	-	.	ID=Dca60699.1.exon8;Parent=Dca60699.1
scaffold93	Augustus	exon	252992	253072	.	-	.	ID=Dca60699.1.exon9;Parent=Dca60699.1
scaffold93	Augustus	exon	253439	253522	.	-	.	ID=Dca60699.1.exon10;Parent=Dca60699.1
scaffold93	Augustus	exon	253631	253695	.	-	.	ID=Dca60699.1.exon11;Parent=Dca60699.1
scaffold93	Augustus	exon	253787	253847	.	-	.	ID=Dca60699.1.exon12;Parent=Dca60699.1
scaffold93	Augustus	exon	254536	254673	.	-	.	ID=Dca60699.1.exon13;Parent=Dca60699.1