Carnation DB

Dca60715.1

Annotation

6-exons
f-1
sp|F6HEJ3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0090g00280#GO:0003676;GO:0000166#2F0P0C
Os03t0569900-01 Similar to RNA Binding Protein 45.
Repeat List (scaffold930)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60715.1	85	419	420	56.9	335	72	2e-132
Target_name	Start	End	Length	Cov(%)
sp\|F6HEJ3_VITVI	84	417	463	72.13

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60715.1	88	414	420	51.66	327	66	1e-124
Target_name	Start	End	Length	Cov(%)
Os03t0569900-01	64	391	403	81.38

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold930	Augustus	mRNA	52681	57370	.	-	.	ID=Dca60715.1;Parent=Dca60715
scaffold930	Augustus	exon	52681	52836	.	-	.	ID=Dca60715.1.exon1;Parent=Dca60715.1
scaffold930	Augus-PASA	exon	52928	53024	.	-	.	ID=Dca60715.1.exon2;Parent=Dca60715.1
scaffold930	Augus-PASA	exon	53135	53265	.	-	.	ID=Dca60715.1.exon3;Parent=Dca60715.1
scaffold930	Augus-PASA	exon	53348	53406	.	-	.	ID=Dca60715.1.exon4;Parent=Dca60715.1
scaffold930	Augus-PASA	exon	55613	56081	.	-	.	ID=Dca60715.1.exon5;Parent=Dca60715.1
scaffold930	Augus-PASA	exon	57023	57370	.	-	.	ID=Dca60715.1.exon6;Parent=Dca60715.1