Carnation DB

Dca60874.1

Annotation

13-exons
f-1
sp|D7TBR5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0016g04210#GO:0008060;GO:0008270;GO:0032312#2F1P0C
AT4G13350.1 | Symbols: NIG | NSP (nuclear shuttle protein)-interacting GTPase | chr4:7770170-7773321 REVERSE LENGTH=602
Repeat List (scaffold936)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60874.1	1	659	659	53.86	659	46	2e-145
Target_name	Start	End	Length	Cov(%)
sp\|D7TBR5_VITVI	1	759	759	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60874.1	1	659	659	42.64	659	41	1e-103
Target_name	Start	End	Length	Cov(%)
AT4G13350.1	1	602	602	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold936	Augustus	mRNA	10266	16721	.	+	.	ID=Dca60874.1;Parent=Dca60874
scaffold936	Augustus	exon	10266	10364	.	+	.	ID=Dca60874.1.exon1;Parent=Dca60874.1
scaffold936	Augus-PASA	exon	11610	11671	.	+	.	ID=Dca60874.1.exon2;Parent=Dca60874.1
scaffold936	Augus-PASA	exon	11970	12057	.	+	.	ID=Dca60874.1.exon3;Parent=Dca60874.1
scaffold936	Augus-PASA	exon	12151	12212	.	+	.	ID=Dca60874.1.exon4;Parent=Dca60874.1
scaffold936	Augustus	exon	12717	12804	.	+	.	ID=Dca60874.1.exon5;Parent=Dca60874.1
scaffold936	Augustus	exon	12949	13386	.	+	.	ID=Dca60874.1.exon6;Parent=Dca60874.1
scaffold936	Augustus	exon	13926	14468	.	+	.	ID=Dca60874.1.exon7;Parent=Dca60874.1
scaffold936	Augustus	exon	14649	14747	.	+	.	ID=Dca60874.1.exon8;Parent=Dca60874.1
scaffold936	Augustus	exon	14828	14932	.	+	.	ID=Dca60874.1.exon9;Parent=Dca60874.1
scaffold936	Augustus	exon	15031	15114	.	+	.	ID=Dca60874.1.exon10;Parent=Dca60874.1
scaffold936	Augustus	exon	15576	15735	.	+	.	ID=Dca60874.1.exon11;Parent=Dca60874.1
scaffold936	Augustus	exon	15883	15928	.	+	.	ID=Dca60874.1.exon12;Parent=Dca60874.1
scaffold936	Augustus	exon	16616	16721	.	+	.	ID=Dca60874.1.exon13;Parent=Dca60874.1