Carnation DB

Dca6113.1

Annotation

8-exons
f-1
sp|D7MGT2_ARALL#Predicted protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_658174#unknown#0F0P0C
AT4G19350.1 | Symbols: EMB3006 | embryo defective 3006 | chr4:10562214-10563676 REVERSE LENGTH=180
Repeat List (scaffold1239)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6113.1	5	166	176	43.18	162	47	9e-37
Target_name	Start	End	Length	Cov(%)
sp\|D7MGT2_ARALL	9	170	180	90

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6113.1	5	166	176	42.61	162	47	2e-37
Target_name	Start	End	Length	Cov(%)
AT4G19350.1	9	170	180	90

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1239	Augustus	mRNA	13562	19861	.	+	.	ID=Dca6113.1;Parent=Dca6113
scaffold1239	Augustus	exon	13562	13657	.	+	.	ID=Dca6113.1.exon1;Parent=Dca6113.1
scaffold1239	Augustus	exon	14992	15060	.	+	.	ID=Dca6113.1.exon2;Parent=Dca6113.1
scaffold1239	Augustus	exon	15961	15990	.	+	.	ID=Dca6113.1.exon3;Parent=Dca6113.1
scaffold1239	Augustus	exon	16712	16744	.	+	.	ID=Dca6113.1.exon4;Parent=Dca6113.1
scaffold1239	Augustus	exon	17685	17755	.	+	.	ID=Dca6113.1.exon5;Parent=Dca6113.1
scaffold1239	Augustus	exon	19131	19212	.	+	.	ID=Dca6113.1.exon6;Parent=Dca6113.1
scaffold1239	Augustus	exon	19595	19687	.	+	.	ID=Dca6113.1.exon7;Parent=Dca6113.1
scaffold1239	Augustus	exon	19805	19861	.	+	.	ID=Dca6113.1.exon8;Parent=Dca6113.1