Carnation DB

Dca6139.1

Annotation

5-exons
f-1
sp|B9S5H1_RICCO#WD-repeat protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0976080#unknown#0F0P0C
Repeat List (scaffold124)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6139.1	4	435	531	56.12	432	69	8e-179
Target_name	Start	End	Length	Cov(%)
sp\|B9S5H1_RICCO	3	427	482	88.17

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6139.1	9	484	531	54.42	476	60	2e-157
Target_name	Start	End	Length	Cov(%)
AT4G35140.1	14	495	496	97.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold124	Augus-PASA	mRNA	69196	73050	.	+	.	ID=Dca6139.1;Parent=Dca6139
scaffold124	Augus-PASA	exon	69196	69309	.	+	.	ID=Dca6139.1.exon1;Parent=Dca6139.1
scaffold124	Augus-PASA	exon	69606	69857	.	+	.	ID=Dca6139.1.exon2;Parent=Dca6139.1
scaffold124	Augustus	exon	69944	70087	.	+	.	ID=Dca6139.1.exon3;Parent=Dca6139.1
scaffold124	Augustus	exon	70486	71229	.	+	.	ID=Dca6139.1.exon4;Parent=Dca6139.1
scaffold124	Augustus	exon	72709	73050	.	+	.	ID=Dca6139.1.exon5;Parent=Dca6139.1