Carnation DB

Dca6145.1

Annotation

8-exons
f-1
sp|F6I0Y8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0038g02640#GO:0003743#1F0P0C
sp|B9RJ84_RICCO#Translation initiation factor if-3, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1032150#GO:0003743#1F0P0C
Repeat List (scaffold124)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6145.1	1	256	423	26.47	256	44	4e-50
Target_name	Start	End	Length	Cov(%)
sp\|F6I0Y8_VITVI	1	248	676	36.68

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6145.1	71	253	423	20.09	183	46	4e-45
Target_name	Start	End	Length	Cov(%)
Os02t0101100-01	43	228	520	35.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold124	Augus-PASA	mRNA	104684	109004	.	+	.	ID=Dca6145.1;Parent=Dca6145
scaffold124	Augus-PASA	exon	104684	104920	.	+	.	ID=Dca6145.1.exon1;Parent=Dca6145.1
scaffold124	Augus-PASA	exon	105001	105094	.	+	.	ID=Dca6145.1.exon2;Parent=Dca6145.1
scaffold124	Augus-PASA	exon	105719	105786	.	+	.	ID=Dca6145.1.exon3;Parent=Dca6145.1
scaffold124	Augus-PASA	exon	106518	106610	.	+	.	ID=Dca6145.1.exon4;Parent=Dca6145.1
scaffold124	Augus-PASA	exon	107584	107640	.	+	.	ID=Dca6145.1.exon5;Parent=Dca6145.1
scaffold124	Augus-PASA	exon	107997	108065	.	+	.	ID=Dca6145.1.exon6;Parent=Dca6145.1
scaffold124	Augus-PASA	exon	108247	108312	.	+	.	ID=Dca6145.1.exon7;Parent=Dca6145.1
scaffold124	Augus-PASA	exon	108417	109004	.	+	.	ID=Dca6145.1.exon8;Parent=Dca6145.1