Carnation DB

Dca61468.1

Annotation

7-exons
f-1
sp|F6HFL1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0011g04450#GO:0016020;GO:0015297;GO:0015238#2F0P1C
AT1G71140.1 | Symbols: | MATE efflux family protein | chr1:26824762-26826748 FORWARD LENGTH=485
Repeat List (scaffold956)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61468.1	1	479	490	67.95	479	70	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HFL1_VITVI	1	478	481	99.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61468.1	2	470	490	57.55	469	61	9e-165
Target_name	Start	End	Length	Cov(%)
AT1G71140.1	5	467	485	95.46

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold956	Augustus	mRNA	65966	72465	.	+	.	ID=Dca61468.1;Parent=Dca61468
scaffold956	Augustus	exon	65966	66217	.	+	.	ID=Dca61468.1.exon1;Parent=Dca61468.1
scaffold956	Augustus	exon	70541	71085	.	+	.	ID=Dca61468.1.exon2;Parent=Dca61468.1
scaffold956	Augustus	exon	71179	71265	.	+	.	ID=Dca61468.1.exon3;Parent=Dca61468.1
scaffold956	Augustus	exon	71356	71412	.	+	.	ID=Dca61468.1.exon4;Parent=Dca61468.1
scaffold956	Augustus	exon	71722	71960	.	+	.	ID=Dca61468.1.exon5;Parent=Dca61468.1
scaffold956	Augus-PASA	exon	72048	72253	.	+	.	ID=Dca61468.1.exon6;Parent=Dca61468.1
scaffold956	Augus-PASA	exon	72379	72465	.	+	.	ID=Dca61468.1.exon7;Parent=Dca61468.1