Carnation DB

Dca6148.1

Annotation

7-exons
f-1
sp|F6I0Z4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0038g02570#GO:0016881#1F0P0C
Os01t0125900-01 Ubiquitin-conjugating enzyme/RWD-like domain containing protein.
Repeat List (scaffold124)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6148.1	9	1129	1129	63.77	1121	62	0
Target_name	Start	End	Length	Cov(%)
sp\|F6I0Z4_VITVI	76	1210	1210	93.8

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6148.1	7	1128	1129	58.19	1122	58	0
Target_name	Start	End	Length	Cov(%)
AT2G16920.1	1	1101	1102	99.9

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold124	Augustus	mRNA	149813	154717	.	+	.	ID=Dca6148.1;Parent=Dca6148
scaffold124	Augustus	exon	149813	151831	.	+	.	ID=Dca6148.1.exon1;Parent=Dca6148.1
scaffold124	Augustus	exon	151932	152066	.	+	.	ID=Dca6148.1.exon2;Parent=Dca6148.1
scaffold124	Augustus	exon	152787	153248	.	+	.	ID=Dca6148.1.exon3;Parent=Dca6148.1
scaffold124	Augus-PASA	exon	153437	153506	.	+	.	ID=Dca6148.1.exon4;Parent=Dca6148.1
scaffold124	Augus-PASA	exon	153803	153942	.	+	.	ID=Dca6148.1.exon5;Parent=Dca6148.1
scaffold124	Augus-PASA	exon	154057	154368	.	+	.	ID=Dca6148.1.exon6;Parent=Dca6148.1
scaffold124	Augus-PASA	exon	154466	154717	.	+	.	ID=Dca6148.1.exon7;Parent=Dca6148.1