Carnation DB

Dca61538.1

Annotation

6-exons
f-1
sp|A9PCS2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_659552#unknown#0F0P0C
Os05t0104800-01 Similar to Eukaryotic translation initiation factor 3 subunit 5 (eIF-3 epsilon) (eIF3 p32 subunit) (eIF3f).
Repeat List (scaffold9590)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61538.1	1	287	287	74.56	287	75	2e-128
Target_name	Start	End	Length	Cov(%)
sp\|A9PCS2_POPTR	1	287	287	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61538.1	16	287	287	65.5	272	70	2e-113
Target_name	Start	End	Length	Cov(%)
Os05t0104800-01	13	284	285	95.43

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold9590	Augus-PASA	mRNA	1418	4335	.	-	.	ID=Dca61538.1;Parent=Dca61538
scaffold9590	Augus-PASA	exon	1418	1507	.	-	.	ID=Dca61538.1.exon1;Parent=Dca61538.1
scaffold9590	Augus-PASA	exon	1972	2085	.	-	.	ID=Dca61538.1.exon2;Parent=Dca61538.1
scaffold9590	Augus-PASA	exon	2197	2318	.	-	.	ID=Dca61538.1.exon3;Parent=Dca61538.1
scaffold9590	Augus-PASA	exon	2419	2648	.	-	.	ID=Dca61538.1.exon4;Parent=Dca61538.1
scaffold9590	Augus-PASA	exon	3080	3159	.	-	.	ID=Dca61538.1.exon5;Parent=Dca61538.1
scaffold9590	Augus-PASA	exon	4108	4335	.	-	.	ID=Dca61538.1.exon6;Parent=Dca61538.1