Carnation DB

Dca6158.1

Annotation

7-exons
f-1
sp|F6I104_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0038g02400#GO:0005524;GO:0004674#2F0P0C
AT1G77280.1 | Symbols: | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain | chr1:29031468-29035882 REVERSE LENGTH=794
Repeat List (scaffold124)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6158.1	41	583	589	51.44	543	56	2e-157
Target_name	Start	End	Length	Cov(%)
sp\|F6I104_VITVI	148	673	681	77.23

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6158.1	120	583	589	40.4	464	51	5e-118
Target_name	Start	End	Length	Cov(%)
AT1G77280.1	328	786	794	57.8

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold124	Augus-PASA	mRNA	242798	246302	.	-	.	ID=Dca6158.1;Parent=Dca6158
scaffold124	Augus-PASA	exon	242798	243067	.	-	.	ID=Dca6158.1.exon1;Parent=Dca6158.1
scaffold124	Augus-PASA	exon	243393	243542	.	-	.	ID=Dca6158.1.exon2;Parent=Dca6158.1
scaffold124	Augus-PASA	exon	243661	243882	.	-	.	ID=Dca6158.1.exon3;Parent=Dca6158.1
scaffold124	Augus-PASA	exon	244062	244225	.	-	.	ID=Dca6158.1.exon4;Parent=Dca6158.1
scaffold124	Augustus	exon	244354	244602	.	-	.	ID=Dca6158.1.exon5;Parent=Dca6158.1
scaffold124	Augustus	exon	244754	245302	.	-	.	ID=Dca6158.1.exon6;Parent=Dca6158.1
scaffold124	Augustus	exon	246137	246302	.	-	.	ID=Dca6158.1.exon7;Parent=Dca6158.1