Carnation DB

Dca6170.1

Annotation

5-exons
f-1
sp|D7LKL0_ARALL#Predicted protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_667294#unknown#0F0P0C
AT2G21045.1 | Symbols: | Rhodanese/Cell cycle control phosphatase superfamily protein | chr2:9027858-9028805 FORWARD LENGTH=169
Repeat List (scaffold124)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6170.1	18	96	96	50	79	59	6e-22
Target_name	Start	End	Length	Cov(%)
sp\|D7LKL0_ARALL	56	137	140	58.57

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6170.1	18	96	96	51.04	79	60	6e-23
Target_name	Start	End	Length	Cov(%)
AT2G21045.1	85	166	169	48.52

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold124	Augustus	mRNA	339787	341039	.	+	.	ID=Dca6170.1;Parent=Dca6170
scaffold124	Augustus	exon	339787	339803	.	+	.	ID=Dca6170.1.exon1;Parent=Dca6170.1
scaffold124	Augustus	exon	339980	340023	.	+	.	ID=Dca6170.1.exon2;Parent=Dca6170.1
scaffold124	Augustus	exon	340463	340533	.	+	.	ID=Dca6170.1.exon3;Parent=Dca6170.1
scaffold124	Augustus	exon	340673	340726	.	+	.	ID=Dca6170.1.exon4;Parent=Dca6170.1
scaffold124	Augustus	exon	340935	341039	.	+	.	ID=Dca6170.1.exon5;Parent=Dca6170.1