Carnation DB

Dca6177.1

Annotation

5-exons
f-1
sp|A5AUE6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_021034#GO:0005524;GO:0003676;GO:0004674;GO:0005529;GO:0015074;GO:0048544#4F2P0C
sp|B6REK6_9BRAS#Copia-like pol polyprotein#Boechera divaricarpa#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Repeat List (scaffold1240)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6177.1	87	490	493	51.92	404	59	2e-138
Target_name	Start	End	Length	Cov(%)
sp\|A5AUE6_VITVI	285	709	2026	20.97

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6177.1	92	221	493	8.51	130	33	3e-14
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	521	637	1401	8.35

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1240	Augustus	mRNA	69810	72437	.	-	.	ID=Dca6177.1;Parent=Dca6177
scaffold1240	Augustus	exon	69810	70654	.	-	.	ID=Dca6177.1.exon1;Parent=Dca6177.1
scaffold1240	Augustus	exon	70889	71254	.	-	.	ID=Dca6177.1.exon2;Parent=Dca6177.1
scaffold1240	Augustus	exon	71835	71885	.	-	.	ID=Dca6177.1.exon3;Parent=Dca6177.1
scaffold1240	Augustus	exon	72159	72263	.	-	.	ID=Dca6177.1.exon4;Parent=Dca6177.1
scaffold1240	Augustus	exon	72323	72437	.	-	.	ID=Dca6177.1.exon5;Parent=Dca6177.1