Carnation DB

Dca61788.1

Annotation

12-exons
f-1
sp|B9HQ97_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_821630#GO:0046429;GO:0005506;GO:0016114#2F1P0C
AT5G60600.1 | Symbols: GCPE, ISPG, CSB3, CLB4, HDS | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase | chr5:24359447-24363274 FORWARD LENGTH=741
Repeat List (scaffold968)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61788.1	1	465	487	80.08	465	84	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HQ97_POPTR	1	465	741	62.75

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61788.1	1	465	487	77.82	465	82	0
Target_name	Start	End	Length	Cov(%)
AT5G60600.1	1	465	741	62.75

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold968	Augustus	mRNA	55918	67352	.	-	.	ID=Dca61788.1;Parent=Dca61788
scaffold968	Augustus	exon	55918	56049	.	-	.	ID=Dca61788.1.exon1;Parent=Dca61788.1
scaffold968	Augustus	exon	56161	56220	.	-	.	ID=Dca61788.1.exon2;Parent=Dca61788.1
scaffold968	Augustus	exon	56583	56660	.	-	.	ID=Dca61788.1.exon3;Parent=Dca61788.1
scaffold968	Augustus	exon	56741	56815	.	-	.	ID=Dca61788.1.exon4;Parent=Dca61788.1
scaffold968	Augustus	exon	56913	57029	.	-	.	ID=Dca61788.1.exon5;Parent=Dca61788.1
scaffold968	Augustus	exon	57483	57713	.	-	.	ID=Dca61788.1.exon6;Parent=Dca61788.1
scaffold968	Augustus	exon	57820	57939	.	-	.	ID=Dca61788.1.exon7;Parent=Dca61788.1
scaffold968	Augustus	exon	64942	65018	.	-	.	ID=Dca61788.1.exon8;Parent=Dca61788.1
scaffold968	Augustus	exon	65097	65197	.	-	.	ID=Dca61788.1.exon9;Parent=Dca61788.1
scaffold968	Augustus	exon	65322	65428	.	-	.	ID=Dca61788.1.exon10;Parent=Dca61788.1
scaffold968	Augustus	exon	66821	66978	.	-	.	ID=Dca61788.1.exon11;Parent=Dca61788.1
scaffold968	Augustus	exon	67145	67352	.	-	.	ID=Dca61788.1.exon12;Parent=Dca61788.1