Carnation DB

Dca6209.1

Annotation

5-exons
f-1
sp|B9GSR0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_816159#GO:0016491#1F0P0C
Os07t0143000-01 Aldo/keto reductase family protein.
Repeat List (scaffold1242)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6209.1	38	182	182	57.14	145	72	2e-57
Target_name	Start	End	Length	Cov(%)
sp\|B9GSR0_POPTR	238	372	372	36.29

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6209.1	38	182	182	54.94	145	69	5e-56
Target_name	Start	End	Length	Cov(%)
Os07t0143000-01	243	377	378	35.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1242	Augustus	mRNA	38819	42824	.	-	.	ID=Dca6209.1;Parent=Dca6209
scaffold1242	Augustus	exon	38819	39004	.	-	.	ID=Dca6209.1.exon1;Parent=Dca6209.1
scaffold1242	Augustus	exon	39135	39227	.	-	.	ID=Dca6209.1.exon2;Parent=Dca6209.1
scaffold1242	Augustus	exon	39319	39401	.	-	.	ID=Dca6209.1.exon3;Parent=Dca6209.1
scaffold1242	Augustus	exon	40010	40089	.	-	.	ID=Dca6209.1.exon4;Parent=Dca6209.1
scaffold1242	Augustus	exon	42718	42824	.	-	.	ID=Dca6209.1.exon5;Parent=Dca6209.1