Dca6233.1
Annotation
- 4-exons
- f-2
- sp|C5YWP2_SORBI#Putative uncharacterized protein Sb09g017230#Sorghum bicolor (Sorghum) (Sorghum vulgare)#Name=Sb09g017230#unknown#0F0P0C
- Os04t0357300-01 Similar to Helicase-like protein [Oryza sativa (japonica cultivar-group)].
- Repeat List (scaffold12438)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6233.1 |
16 |
358 |
487 |
32.03 |
343 |
46 |
5e-85
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|C5YWP2_SORBI |
28 |
370 |
512 |
66.99 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6233.1 |
27 |
358 |
487 |
31.41 |
332 |
46 |
2e-78
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0357300-01 |
66 |
396 |
442 |
74.88 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12438 |
Augustus |
mRNA |
1 |
2728 |
. |
+ |
. |
ID=Dca6233.1;Parent=Dca6233 |
| scaffold12438 |
Augustus |
exon |
1 |
1072 |
. |
+ |
. |
ID=Dca6233.1.exon1;Parent=Dca6233.1 |
| scaffold12438 |
Augustus |
exon |
1375 |
1473 |
. |
+ |
. |
ID=Dca6233.1.exon2;Parent=Dca6233.1 |
| scaffold12438 |
Augustus |
exon |
1922 |
2050 |
. |
+ |
. |
ID=Dca6233.1.exon3;Parent=Dca6233.1 |
| scaffold12438 |
Augustus |
exon |
2564 |
2728 |
. |
+ |
. |
ID=Dca6233.1.exon4;Parent=Dca6233.1 |
