Dca6235.1
Annotation
- 3-exons
- f-1
- sp|F6HQT2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0040g00250#unknown#0F0P0C
- AT5G45790.2 | Symbols: | Ubiquitin carboxyl-terminal hydrolase family protein | chr5:18572345-18573664 FORWARD LENGTH=439
- Repeat List (scaffold1244)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6235.1 |
128 |
463 |
463 |
46 |
336 |
64 |
3e-120
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HQT2_VITVI |
77 |
411 |
441 |
75.96 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6235.1 |
128 |
460 |
463 |
44.06 |
333 |
61 |
6e-119
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G45790.2 |
105 |
439 |
439 |
76.3 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1244 |
Augustus |
mRNA |
9176 |
12098 |
. |
+ |
. |
ID=Dca6235.1;Parent=Dca6235 |
| scaffold1244 |
Augustus |
exon |
9176 |
9349 |
. |
+ |
. |
ID=Dca6235.1.exon1;Parent=Dca6235.1 |
| scaffold1244 |
Augustus |
exon |
9440 |
9652 |
. |
+ |
. |
ID=Dca6235.1.exon2;Parent=Dca6235.1 |
| scaffold1244 |
Augustus |
exon |
11094 |
12098 |
. |
+ |
. |
ID=Dca6235.1.exon3;Parent=Dca6235.1 |
