Carnation DB

Dca6236.1

Annotation

5-exons
f-1
sp|A5C7G8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_012100#GO:0005634;GO:0003677;GO:0006355#1F1P1C
AT5G37260.1 | Symbols: RVE2, CIR1 | Homeodomain-like superfamily protein | chr5:14751344-14752972 REVERSE LENGTH=287
Repeat List (scaffold1244)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6236.1	1	238	281	44.48	238	46	4e-45
Target_name	Start	End	Length	Cov(%)
sp\|A5C7G8_VITVI	53	325	543	50.27

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6236.1	35	238	281	38.07	204	53	9e-38
Target_name	Start	End	Length	Cov(%)
AT5G37260.1	25	195	287	59.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1244	Augustus	mRNA	15118	16397	.	+	.	ID=Dca6236.1;Parent=Dca6236
scaffold1244	Augustus	exon	15118	15222	.	+	.	ID=Dca6236.1.exon1;Parent=Dca6236.1
scaffold1244	Augustus	exon	15338	15449	.	+	.	ID=Dca6236.1.exon2;Parent=Dca6236.1
scaffold1244	Augustus	exon	15535	15596	.	+	.	ID=Dca6236.1.exon3;Parent=Dca6236.1
scaffold1244	Augustus	exon	15736	16077	.	+	.	ID=Dca6236.1.exon4;Parent=Dca6236.1
scaffold1244	Augustus	exon	16173	16397	.	+	.	ID=Dca6236.1.exon5;Parent=Dca6236.1