Dca6241.1
Annotation
- 3-exons
- f-1
- sp|A5B706_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_041750#unknown#0F0P0C
- AT5G54680.1 | Symbols: ILR3, bHLH105 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr5:22217270-22218993 FORWARD LENGTH=234
- Repeat List (scaffold1244)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6241.1 |
35 |
194 |
194 |
40.72 |
160 |
46 |
4e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5B706_VITVI |
27 |
190 |
190 |
86.31 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6241.1 |
63 |
194 |
194 |
30.41 |
132 |
40 |
6e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G54680.1 |
90 |
234 |
234 |
61.96 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1244 |
Augustus |
mRNA |
38470 |
41473 |
. |
+ |
. |
ID=Dca6241.1;Parent=Dca6241 |
| scaffold1244 |
Augustus |
exon |
38470 |
38657 |
. |
+ |
. |
ID=Dca6241.1.exon1;Parent=Dca6241.1 |
| scaffold1244 |
Augustus |
exon |
40961 |
41132 |
. |
+ |
. |
ID=Dca6241.1.exon2;Parent=Dca6241.1 |
| scaffold1244 |
Augustus |
exon |
41249 |
41473 |
. |
+ |
. |
ID=Dca6241.1.exon3;Parent=Dca6241.1 |
