Dca62448.1
Annotation
- 2-exons
- f-1
- sp|Q9ZPU4_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g13940#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold991)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca62448.1 |
2 |
1352 |
1352 |
47.85 |
1351 |
44 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZPU4_ARATH |
18 |
1501 |
1501 |
98.86 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca62448.1 |
324 |
1342 |
1352 |
25.96 |
1019 |
33 |
9e-148
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
379 |
1389 |
1401 |
72.16 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold991 |
Augustus |
mRNA |
76958 |
81120 |
. |
- |
. |
ID=Dca62448.1;Parent=Dca62448 |
| scaffold991 |
Augustus |
exon |
76958 |
77972 |
. |
- |
. |
ID=Dca62448.1.exon1;Parent=Dca62448.1 |
| scaffold991 |
Augustus |
exon |
78077 |
81120 |
. |
- |
. |
ID=Dca62448.1.exon2;Parent=Dca62448.1 |
