Carnation DB

Dca6271.1

Annotation

6-exons
f-1
sp|F6HEG7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0039g02400#GO:0005524;GO:0004674#2F0P0C
sp|B9S1Z3_RICCO#ATP binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1324440#GO:0005524;GO:0004683#2F0P0C
Repeat List (scaffold12452)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6271.1	48	180	218	33.48	133	55	2e-31
Target_name	Start	End	Length	Cov(%)
sp\|F6HEG7_VITVI	349	482	1348	9.94

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6271.1	48	182	218	27.98	135	45	8e-22
Target_name	Start	End	Length	Cov(%)
AT1G50240.2	346	481	1322	10.28

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold12452	Augustus	mRNA	2346	4965	.	+	.	ID=Dca6271.1;Parent=Dca6271
scaffold12452	Augustus	exon	2346	2419	.	+	.	ID=Dca6271.1.exon1;Parent=Dca6271.1
scaffold12452	Augus-PASA	exon	3014	3069	.	+	.	ID=Dca6271.1.exon2;Parent=Dca6271.1
scaffold12452	Augus-PASA	exon	3226	3364	.	+	.	ID=Dca6271.1.exon3;Parent=Dca6271.1
scaffold12452	Augus-PASA	exon	3522	3690	.	+	.	ID=Dca6271.1.exon4;Parent=Dca6271.1
scaffold12452	Augus-PASA	exon	4426	4524	.	+	.	ID=Dca6271.1.exon5;Parent=Dca6271.1
scaffold12452	Augus-PASA	exon	4846	4965	.	+	.	ID=Dca6271.1.exon6;Parent=Dca6271.1