Carnation DB

Dca6273.1

Annotation

6-exons
f-1
sp|A5BLF6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_040899#unknown#0F0P0C
AT5G41840.1 | Symbols: | F-box/RNI-like superfamily protein | chr5:16754436-16756263 REVERSE LENGTH=540
Repeat List (scaffold12454)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6273.1	478	597	600	6.83	120	32	7e-08
Target_name	Start	End	Length	Cov(%)
sp\|A5BLF6_VITVI	327	454	607	21.08

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6273.1	17	369	600	20	353	31	6e-32
Target_name	Start	End	Length	Cov(%)
AT5G41840.1	10	391	540	70.74

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold12454	Augustus	mRNA	1629	4455	.	-	.	ID=Dca6273.1;Parent=Dca6273
scaffold12454	Augustus	exon	1629	1877	.	-	.	ID=Dca6273.1.exon1;Parent=Dca6273.1
scaffold12454	Augustus	exon	2032	2165	.	-	.	ID=Dca6273.1.exon2;Parent=Dca6273.1
scaffold12454	Augustus	exon	2267	2378	.	-	.	ID=Dca6273.1.exon3;Parent=Dca6273.1
scaffold12454	Augustus	exon	2934	3152	.	-	.	ID=Dca6273.1.exon4;Parent=Dca6273.1
scaffold12454	Augustus	exon	3296	3445	.	-	.	ID=Dca6273.1.exon5;Parent=Dca6273.1
scaffold12454	Augustus	exon	3517	4455	.	-	.	ID=Dca6273.1.exon6;Parent=Dca6273.1