Carnation DB

Dca6299.1

Annotation

8-exons
f-1
sp|A5BRR6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_001546#unknown#0F0P0C
Os08t0208400-02 Transposon, En/Spm-like domain containing protein.
Repeat List (scaffold1247)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6299.1	9	441	886	21.55	433	41	3e-102
Target_name	Start	End	Length	Cov(%)
sp\|A5BRR6_VITVI	6	479	860	55.11

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6299.1	139	456	886	12.18	318	31	6e-32
Target_name	Start	End	Length	Cov(%)
Os12t0544600-00	37	372	422	79.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1247	Augustus	mRNA	9189	24046	.	-	.	ID=Dca6299.1;Parent=Dca6299
scaffold1247	Augustus	exon	9189	9455	.	-	.	ID=Dca6299.1.exon1;Parent=Dca6299.1
scaffold1247	Augustus	exon	9602	10140	.	-	.	ID=Dca6299.1.exon2;Parent=Dca6299.1
scaffold1247	Augustus	exon	19893	19977	.	-	.	ID=Dca6299.1.exon3;Parent=Dca6299.1
scaffold1247	Augustus	exon	20252	20458	.	-	.	ID=Dca6299.1.exon4;Parent=Dca6299.1
scaffold1247	Augustus	exon	20704	20741	.	-	.	ID=Dca6299.1.exon5;Parent=Dca6299.1
scaffold1247	Augustus	exon	20828	21011	.	-	.	ID=Dca6299.1.exon6;Parent=Dca6299.1
scaffold1247	Augustus	exon	22493	23332	.	-	.	ID=Dca6299.1.exon7;Parent=Dca6299.1
scaffold1247	Augustus	exon	23546	24046	.	-	.	ID=Dca6299.1.exon8;Parent=Dca6299.1