Carnation DB

Dca6376.1

Annotation

8-exons
f-1
sp|B9IMJ5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_578806#GO:0005622;GO:0003676#1F0P1C
sp|B9SC24_RICCO#Zinc finger protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0701710#GO:0005622;GO:0003676#1F0P1C
Repeat List (scaffold1249)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6376.1	2	752	756	47.35	751	45	1e-148
Target_name	Start	End	Length	Cov(%)
sp\|B9IMJ5_POPTR	3	736	737	99.59

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6376.1	10	752	756	43.51	743	42	8e-125
Target_name	Start	End	Length	Cov(%)
AT3G09850.1	32	780	781	95.9

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1249	Augustus	mRNA	65469	69280	.	-	.	ID=Dca6376.1;Parent=Dca6376
scaffold1249	Augustus	exon	65469	66200	.	-	.	ID=Dca6376.1.exon1;Parent=Dca6376.1
scaffold1249	Augustus	exon	66304	66373	.	-	.	ID=Dca6376.1.exon2;Parent=Dca6376.1
scaffold1249	Augustus	exon	66814	66875	.	-	.	ID=Dca6376.1.exon3;Parent=Dca6376.1
scaffold1249	Augustus	exon	66962	67036	.	-	.	ID=Dca6376.1.exon4;Parent=Dca6376.1
scaffold1249	Augustus	exon	67445	67536	.	-	.	ID=Dca6376.1.exon5;Parent=Dca6376.1
scaffold1249	Augustus	exon	67849	68830	.	-	.	ID=Dca6376.1.exon6;Parent=Dca6376.1
scaffold1249	Augustus	exon	68942	69060	.	-	.	ID=Dca6376.1.exon7;Parent=Dca6376.1
scaffold1249	Augustus	exon	69142	69280	.	-	.	ID=Dca6376.1.exon8;Parent=Dca6376.1