Dca6379.1
Annotation
- 2-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold12493)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6379.1 |
77 |
306 |
317 |
50.15 |
230 |
70 |
2e-91
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
861 |
1090 |
1313 |
17.51 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6379.1 |
77 |
311 |
317 |
26.81 |
235 |
37 |
5e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
982 |
1214 |
1428 |
16.31 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12493 |
Augustus |
mRNA |
542 |
3730 |
. |
+ |
. |
ID=Dca6379.1;Parent=Dca6379 |
| scaffold12493 |
Augustus |
exon |
542 |
772 |
. |
+ |
. |
ID=Dca6379.1.exon1;Parent=Dca6379.1 |
| scaffold12493 |
Augustus |
exon |
3008 |
3730 |
. |
+ |
. |
ID=Dca6379.1.exon2;Parent=Dca6379.1 |
