Carnation DB

Dca6417.1

Annotation

8-exons
f-1
sp|B9GVI7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_830957#GO:0005509#1F0P0C
sp|B9SMU9_RICCO#Defective in cullin neddylation protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0471020#GO:0005509#1F0P0C
Repeat List (scaffold1250)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6417.1	1	207	207	79.71	207	72	2e-88
Target_name	Start	End	Length	Cov(%)
sp\|B9GVI7_POPTR	1	232	232	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6417.1	10	207	207	68.59	198	63	9e-79
Target_name	Start	End	Length	Cov(%)
AT1G15860.3	11	236	236	95.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1250	Augustus	mRNA	71861	74596	.	+	.	ID=Dca6417.1;Parent=Dca6417
scaffold1250	Augustus	exon	71861	71939	.	+	.	ID=Dca6417.1.exon1;Parent=Dca6417.1
scaffold1250	Augustus	exon	72858	72942	.	+	.	ID=Dca6417.1.exon2;Parent=Dca6417.1
scaffold1250	Augustus	exon	73032	73106	.	+	.	ID=Dca6417.1.exon3;Parent=Dca6417.1
scaffold1250	Augustus	exon	73209	73245	.	+	.	ID=Dca6417.1.exon4;Parent=Dca6417.1
scaffold1250	Augustus	exon	73491	73574	.	+	.	ID=Dca6417.1.exon5;Parent=Dca6417.1
scaffold1250	Augustus	exon	73674	73734	.	+	.	ID=Dca6417.1.exon6;Parent=Dca6417.1
scaffold1250	Augustus	exon	73834	73940	.	+	.	ID=Dca6417.1.exon7;Parent=Dca6417.1
scaffold1250	Augustus	exon	74501	74596	.	+	.	ID=Dca6417.1.exon8;Parent=Dca6417.1