Dca6428.1
Annotation
- 3-exons
- f-1
- sp|A5BW89_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_028833#GO:0003676;GO:0015074#1F1P0C
- sp|O23864_9ORYZ#Polyprotein#Oryza australiensis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold12509)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6428.1 |
15 |
361 |
365 |
44.65 |
347 |
39 |
3e-80
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BW89_VITVI |
663 |
1082 |
1090 |
38.53 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6428.1 |
254 |
362 |
365 |
9.04 |
109 |
31 |
2e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1314 |
1420 |
1428 |
7.49 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12509 |
Augustus |
mRNA |
237 |
1802 |
. |
- |
. |
ID=Dca6428.1;Parent=Dca6428 |
| scaffold12509 |
Augustus |
exon |
237 |
584 |
. |
- |
. |
ID=Dca6428.1.exon1;Parent=Dca6428.1 |
| scaffold12509 |
Augustus |
exon |
746 |
891 |
. |
- |
. |
ID=Dca6428.1.exon2;Parent=Dca6428.1 |
| scaffold12509 |
Augustus |
exon |
1199 |
1802 |
. |
- |
. |
ID=Dca6428.1.exon3;Parent=Dca6428.1 |
