Carnation DB

Dca6433.1

Annotation

7-exons
f-1
sp|D7MET3_ARALL#Vesicle-associated membrane family protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_492738#GO:0005198#1F0P0C
Repeat List (scaffold1251)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6433.1	66	286	286	55.59	221	71	9e-90
Target_name	Start	End	Length	Cov(%)
sp\|D7MET3_ARALL	77	300	300	74.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6433.1	63	286	286	54.54	224	65	7e-86
Target_name	Start	End	Length	Cov(%)
AT4G21450.3	77	314	314	75.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1251	Augus-PASA	mRNA	26300	29479	.	+	.	ID=Dca6433.1;Parent=Dca6433
scaffold1251	Augus-PASA	exon	26300	26627	.	+	.	ID=Dca6433.1.exon1;Parent=Dca6433.1
scaffold1251	Augus-PASA	exon	26869	26939	.	+	.	ID=Dca6433.1.exon2;Parent=Dca6433.1
scaffold1251	Augus-PASA	exon	27343	27424	.	+	.	ID=Dca6433.1.exon3;Parent=Dca6433.1
scaffold1251	Augus-PASA	exon	27514	27635	.	+	.	ID=Dca6433.1.exon4;Parent=Dca6433.1
scaffold1251	Augus-PASA	exon	28744	28821	.	+	.	ID=Dca6433.1.exon5;Parent=Dca6433.1
scaffold1251	Augus-PASA	exon	29156	29275	.	+	.	ID=Dca6433.1.exon6;Parent=Dca6433.1
scaffold1251	Augus-PASA	exon	29420	29479	.	+	.	ID=Dca6433.1.exon7;Parent=Dca6433.1