Dca6457.1
Annotation
- 3-exons
- f-1
- sp|B9HF16_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_802937#GO:0000151;GO:0005488;GO:0004842#2F0P1C
- Os06t0480000-01 Zinc finger, RING/FYVE/PHD-type domain containing protein.
- Repeat List (scaffold1252)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6457.1 |
1 |
356 |
356 |
46.34 |
356 |
43 |
1e-66
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HF16_POPTR |
370 |
746 |
747 |
50.46 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6457.1 |
48 |
356 |
356 |
30.89 |
309 |
32 |
7e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0480000-01 |
414 |
756 |
762 |
45.01 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1252 |
Augustus |
mRNA |
68150 |
69420 |
. |
- |
. |
ID=Dca6457.1;Parent=Dca6457 |
| scaffold1252 |
Augustus |
exon |
68150 |
68544 |
. |
- |
. |
ID=Dca6457.1.exon1;Parent=Dca6457.1 |
| scaffold1252 |
Augustus |
exon |
68630 |
68904 |
. |
- |
. |
ID=Dca6457.1.exon2;Parent=Dca6457.1 |
| scaffold1252 |
Augustus |
exon |
69020 |
69420 |
. |
- |
. |
ID=Dca6457.1.exon3;Parent=Dca6457.1 |
