Carnation DB

Dca6481.1

Annotation

9-exons
f-1
sp|F6H5Q8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0108g00350#GO:0016491#1F0P0C
AT3G28760.2 | Symbols: | CONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase, prokaryotic-type (InterPro:IPR002812); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr3:10793126-10795304 REVERSE LENGTH=444
Repeat List (scaffold1253)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6481.1	4	354	354	67.79	351	68	5e-144
Target_name	Start	End	Length	Cov(%)
sp\|F6H5Q8_VITVI	76	428	428	82.47

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6481.1	4	354	354	63.55	351	64	2e-136
Target_name	Start	End	Length	Cov(%)
AT3G28760.2	91	444	444	79.72

seqname	source	feature	start	end	score	strand	frame	group
scaffold1253	Augustus	mRNA	63373	69477	.	+	.	ID=Dca6481.1;Parent=Dca6481
scaffold1253	Augustus	exon	63373	63502	.	+	.	ID=Dca6481.1.exon1;Parent=Dca6481.1
scaffold1253	Augus-PASA	exon	65522	65685	.	+	.	ID=Dca6481.1.exon2;Parent=Dca6481.1
scaffold1253	Augus-PASA	exon	66073	66171	.	+	.	ID=Dca6481.1.exon3;Parent=Dca6481.1
scaffold1253	Augus-PASA	exon	67258	67326	.	+	.	ID=Dca6481.1.exon4;Parent=Dca6481.1
scaffold1253	Augus-PASA	exon	67406	67546	.	+	.	ID=Dca6481.1.exon5;Parent=Dca6481.1
scaffold1253	Augus-PASA	exon	67653	67742	.	+	.	ID=Dca6481.1.exon6;Parent=Dca6481.1
scaffold1253	Augus-PASA	exon	68208	68375	.	+	.	ID=Dca6481.1.exon7;Parent=Dca6481.1
scaffold1253	Augus-PASA	exon	69189	69264	.	+	.	ID=Dca6481.1.exon8;Parent=Dca6481.1
scaffold1253	Augus-PASA	exon	69350	69477	.	+	.	ID=Dca6481.1.exon9;Parent=Dca6481.1