Dca6496.1
Annotation
- 3-exons
- f-1
- sp|Q5Z6G3_ORYSJ#Putative RNA polymerase I, II and III 16.5 kDa subunit#Oryza sativa subsp japonica (Rice)#Name=P0028E05.28-1#GO:0006351#0F1P0C
- Repeat List (scaffold1254)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6496.1 |
1 |
94 |
97 |
55.67 |
94 |
57 |
2e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q5Z6G3_ORYSJ |
300 |
394 |
396 |
23.98 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6496.1 |
6 |
94 |
97 |
52.57 |
89 |
57 |
6e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G54250.1 |
57 |
144 |
146 |
60.27 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1254 |
Augustus |
mRNA |
36445 |
37770 |
. |
- |
. |
ID=Dca6496.1;Parent=Dca6496 |
| scaffold1254 |
Augustus |
exon |
36445 |
36559 |
. |
- |
. |
ID=Dca6496.1.exon1;Parent=Dca6496.1 |
| scaffold1254 |
Augustus |
exon |
36678 |
36772 |
. |
- |
. |
ID=Dca6496.1.exon2;Parent=Dca6496.1 |
| scaffold1254 |
Augustus |
exon |
37687 |
37770 |
. |
- |
. |
ID=Dca6496.1.exon3;Parent=Dca6496.1 |
