Carnation DB

Dca6498.1

Annotation

20-exons
f-1
sp|F6GUN3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g00450#GO:0016592;GO:0001104#1F0P1C
Os05t0447500-00 Mediator complex, subunit Med13 domain containing protein.
Repeat List (scaffold1254)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6498.1	1	1927	1927	61.18	1927	59	0
Target_name	Start	End	Length	Cov(%)
sp\|F6GUN3_VITVI	1	1984	1987	99.84

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6498.1	1	1927	1927	55.11	1927	54	0
Target_name	Start	End	Length	Cov(%)
AT1G55325.2	1	1903	2001	95.1

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1254	Augustus	mRNA	45462	60930	.	+	.	ID=Dca6498.1;Parent=Dca6498
scaffold1254	Augustus	exon	45462	45485	.	+	.	ID=Dca6498.1.exon1;Parent=Dca6498.1
scaffold1254	Augustus	exon	45607	45805	.	+	.	ID=Dca6498.1.exon2;Parent=Dca6498.1
scaffold1254	Augustus	exon	46290	46376	.	+	.	ID=Dca6498.1.exon3;Parent=Dca6498.1
scaffold1254	Augustus	exon	46459	46546	.	+	.	ID=Dca6498.1.exon4;Parent=Dca6498.1
scaffold1254	Augustus	exon	46666	46749	.	+	.	ID=Dca6498.1.exon5;Parent=Dca6498.1
scaffold1254	Augustus	exon	47035	47139	.	+	.	ID=Dca6498.1.exon6;Parent=Dca6498.1
scaffold1254	Augustus	exon	47238	47317	.	+	.	ID=Dca6498.1.exon7;Parent=Dca6498.1
scaffold1254	Augustus	exon	48907	48985	.	+	.	ID=Dca6498.1.exon8;Parent=Dca6498.1
scaffold1254	Augustus	exon	49495	49809	.	+	.	ID=Dca6498.1.exon9;Parent=Dca6498.1
scaffold1254	Augustus	exon	51046	51292	.	+	.	ID=Dca6498.1.exon10;Parent=Dca6498.1
scaffold1254	Augustus	exon	53179	53418	.	+	.	ID=Dca6498.1.exon11;Parent=Dca6498.1
scaffold1254	Augustus	exon	53679	55016	.	+	.	ID=Dca6498.1.exon12;Parent=Dca6498.1
scaffold1254	Augustus	exon	55249	55516	.	+	.	ID=Dca6498.1.exon13;Parent=Dca6498.1
scaffold1254	Augustus	exon	55903	56029	.	+	.	ID=Dca6498.1.exon14;Parent=Dca6498.1
scaffold1254	Augustus	exon	56539	56626	.	+	.	ID=Dca6498.1.exon15;Parent=Dca6498.1
scaffold1254	Augustus	exon	56738	56816	.	+	.	ID=Dca6498.1.exon16;Parent=Dca6498.1
scaffold1254	Augustus	exon	57027	57322	.	+	.	ID=Dca6498.1.exon17;Parent=Dca6498.1
scaffold1254	Augustus	exon	58268	59366	.	+	.	ID=Dca6498.1.exon18;Parent=Dca6498.1
scaffold1254	Augustus	exon	59766	60119	.	+	.	ID=Dca6498.1.exon19;Parent=Dca6498.1
scaffold1254	Augustus	exon	60344	60930	.	+	.	ID=Dca6498.1.exon20;Parent=Dca6498.1