Carnation DB

Dca6517.1

Annotation

5-exons
f-1
sp|A9PEI9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_822657#GO:0003735;GO:0006412#1F1P0C
AT2G01250.1 | Symbols: | Ribosomal protein L30/L7 family protein | chr2:132943-134264 REVERSE LENGTH=242
Repeat List (scaffold1255)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6517.1	2	137	137	80.29	136	74	7e-55
Target_name	Start	End	Length	Cov(%)
sp\|A9PEI9_POPTR	1	150	244	61.47

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6517.1	5	137	137	78.1	133	73	3e-53
Target_name	Start	End	Length	Cov(%)
AT2G01250.1	2	148	242	60.74

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1255	Augustus	mRNA	45278	46150	.	+	.	ID=Dca6517.1;Parent=Dca6517
scaffold1255	Augustus	exon	45278	45435	.	+	.	ID=Dca6517.1.exon1;Parent=Dca6517.1
scaffold1255	Augustus	exon	45564	45644	.	+	.	ID=Dca6517.1.exon2;Parent=Dca6517.1
scaffold1255	Augustus	exon	45751	45808	.	+	.	ID=Dca6517.1.exon3;Parent=Dca6517.1
scaffold1255	Augustus	exon	45942	46021	.	+	.	ID=Dca6517.1.exon4;Parent=Dca6517.1
scaffold1255	Augustus	exon	46114	46150	.	+	.	ID=Dca6517.1.exon5;Parent=Dca6517.1