Dca655.1
Annotation
- 3-exons
- f-3
- sp|Q9FKA8_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold10144)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca655.1 |
1 |
103 |
273 |
11.35 |
103 |
30 |
6e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9FKA8_ARATH |
136 |
234 |
370 |
26.75 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca655.1 |
1 |
103 |
273 |
14.28 |
103 |
38 |
1e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G21280.1 |
126 |
229 |
237 |
43.88 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold10144 |
Augustus |
mRNA |
616 |
2405 |
. |
+ |
. |
ID=Dca655.1;Parent=Dca655 |
| scaffold10144 |
Augustus |
exon |
616 |
933 |
. |
+ |
. |
ID=Dca655.1.exon1;Parent=Dca655.1 |
| scaffold10144 |
Augustus |
exon |
1835 |
2314 |
. |
+ |
. |
ID=Dca655.1.exon2;Parent=Dca655.1 |
| scaffold10144 |
Augustus |
exon |
2380 |
2405 |
. |
+ |
. |
ID=Dca655.1.exon3;Parent=Dca655.1 |
