Dca6557.1
Annotation
- 2-exons
- f-1
- sp|Q9LVQ2_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1258)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6557.1 |
6 |
259 |
318 |
28.93 |
254 |
33 |
5e-46
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9LVQ2_ARATH |
27 |
306 |
1491 |
18.77 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6557.1 |
3 |
222 |
318 |
21.38 |
220 |
31 |
4e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G21280.1 |
16 |
237 |
237 |
93.67 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1258 |
Augustus |
mRNA |
47658 |
48716 |
. |
+ |
. |
ID=Dca6557.1;Parent=Dca6557 |
| scaffold1258 |
Augustus |
exon |
47658 |
48365 |
. |
+ |
. |
ID=Dca6557.1.exon1;Parent=Dca6557.1 |
| scaffold1258 |
Augustus |
exon |
48468 |
48716 |
. |
+ |
. |
ID=Dca6557.1.exon2;Parent=Dca6557.1 |
