Carnation DB

Dca6701.1

Annotation

7-exons
f-1
sp|B9SJ51_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0843050#GO:0005524;GO:0004003;GO:0003676;GO:0006310;GO:0006281#3F2P0C
AT2G01440.1 | Symbols: | DEAD/DEAH box RNA helicase family protein | chr2:193950-199056 REVERSE LENGTH=973
Repeat List (scaffold1265)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6701.1	1	447	504	64.08	447	70	0
Target_name	Start	End	Length	Cov(%)
sp\|B9SJ51_RICCO	487	953	983	47.5

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6701.1	1	447	504	61.3	447	67	1e-177
Target_name	Start	End	Length	Cov(%)
AT2G01440.1	477	943	973	47.99

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1265	Augustus	mRNA	98832	103809	.	-	.	ID=Dca6701.1;Parent=Dca6701
scaffold1265	Augustus	exon	98832	99578	.	-	.	ID=Dca6701.1.exon1;Parent=Dca6701.1
scaffold1265	Augustus	exon	99913	99996	.	-	.	ID=Dca6701.1.exon2;Parent=Dca6701.1
scaffold1265	Augustus	exon	100137	100295	.	-	.	ID=Dca6701.1.exon3;Parent=Dca6701.1
scaffold1265	Augustus	exon	102582	102668	.	-	.	ID=Dca6701.1.exon4;Parent=Dca6701.1
scaffold1265	Augustus	exon	102759	102908	.	-	.	ID=Dca6701.1.exon5;Parent=Dca6701.1
scaffold1265	Augustus	exon	103195	103266	.	-	.	ID=Dca6701.1.exon6;Parent=Dca6701.1
scaffold1265	Augustus	exon	103594	103809	.	-	.	ID=Dca6701.1.exon7;Parent=Dca6701.1